PoPy
1.0.3
  • Getting Started Guide
  • Principles of Pharmacokinetics
  • Population Models in PoPy
  • PoPy Example Models
  • PoPy for Nonmem Users
  • PoPy Reference Guide
    • Open a PoPy Command Prompt
    • PoPy Activation
    • Configure PoPy
    • PoPy Website
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    • Script File Formats
      • Fit Script
      • Gen Script
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      • Tut Script
      • Comp Script
      • MFit Script
      • MGen Script
      • MSim Script
      • MTut Script
      • MComp Script
      • Grph Script
      • Vpc Script
        • Full Structure of a VPC Script
      • FitSum Script
      • GenSum Script
      • TutSum Script
      • N2PDat Script
      • P2NDat Script
    • Script File Sections
    • Script File Elements
    • Script File Outputs
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  • Appendices
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Vpc Script¶

Creates VPC plots. The visual predictive check is designed to plot a population of PK/PD curves on one graph.

A Vpc Script is usually created as a child script of a MSim Script.

See Visual Predictive Check for Simple PopPK Model and Visual Predictive Check for Two Compartment PopPK Model for working examples.

Full Structure of a VPC Script¶

  • METHOD_OPTIONS
    • py_module
  • FILE_PATHS
    • input_data_file
    • msim_folder
    • pred_file_glob
    • output_folder
    • log_folder
    • output_file_ext
  • DATA_FIELDS
    • type_field
    • id_field
    • time_field
  • OUTPUT_GRAPHS
    • COMB_SPAG_VPC
      • graph_title
      • y_axis_label_list
      • y_var_src_list
      • y_var_label_list
      • y_var_colour_list
      • y_var_symbol_list
      • x_var
      • x_axis_label
      • x_scale
      • y_var_list
      • y_scale_list
      • options_list
    • COMB_QUANT_VPC
      • graph_title
      • y_axis_label_list
      • y_var_src_list
      • y_var_label_list
      • y_var_colour_list
      • y_var_symbol_list
      • x_var
      • x_axis_label
      • x_scale
      • y_var_list
      • y_scale_list
      • options_list
      • bin_indexer
        • EQUAL_SPACE
          • n_bins
        • UNEQUAL_SPACE
          • bin_edge_list
        • K_MEANS
          • n_bins
          • init_method
      • quantile_list
      • min_bin_count
    • COMB_QUANT_SIM_VPC
      • graph_title
      • y_axis_label_list
      • y_var_src_list
      • y_var_label_list
      • y_var_colour_list
      • x_var
      • x_axis_label
      • x_scale
      • y_var_list
      • y_scale_list
      • bin_indexer
        • EQUAL_SPACE
          • n_bins
        • UNEQUAL_SPACE
          • bin_edge_list
        • K_MEANS
          • n_bins
          • init_method
      • quantile_list
      • min_bin_count
      • options_list
      • conf_interval_prop
    • IND_SPAG_VPC
      • graph_title
      • y_axis_label_list
      • y_var_src_list
      • y_var_label_list
      • y_var_colour_list
      • y_var_symbol_list
      • x_var
      • x_axis_label
      • x_scale
      • y_var_list
      • y_scale_list
      • options_list
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