popy
1.3.1
Preliminaries
Operating Instructions
Simulating A Single Individual
Simulating A Population Of Individuals
Estimating Population Parameters
Working With Many Populations
PoPy
for Nonmem Users
PoPy
Reference Guide
PoPy
Quick Reference Guide
Command Line Tools
Script File Formats
Fit Script
Gen Script
Sim Script
Tut Script
Comp Script
MFit Script
MGen Script
MSim Script
MTut Script
MComp Script
Grph Script
Full Structure of a Grph Script
Vpc Script
FitSum Script
GenSum Script
TutSum Script
Script File Sections
Script File Elements
Script File Outputs
Glossary
HTML Summary Links
Release Notes
Notepad++
Validation Examples
Troubleshooting
Bibliography
popy
PoPy
Reference Guide
Script File Formats
Grph Script
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Grph Script
Outputs basic plots given input data sets and fitting results.
Full Structure of a Grph Script
METHOD_OPTIONS
py_module
PARALLEL
SINGLE
progress_bar_length
MPI_WORKERS
n_workers
cpu_load
progress_bar_length
FILE_PATHS
output_folder
log_folder
output_file_ext
delete_old_files_flag
solutions
DATA_FIELDS
type_field
id_field
time_field
PREPROCESS
OUTPUT_GRAPHS
COMB_SPAG_GRPH
output_subdir
graph_title
x_axis_label
x_var
x_scale
y_axis_label_list
y_var_src_list
y_var_list
y_var_label_list
y_var_colour_list
y_var_symbol_list
y_scale_list
options_list
SCATTER_GRPH
output_subdir
graph_title
x_axis_label
x_var_src
x_var
x_scale
y_axis_label_list
y_var_src_list
y_var_list
y_var_label_list
y_var_colour_list
y_var_symbol_list
y_scale_list
options_list
dot_size
RES_VS_X_GRPH
output_subdir
graph_title
x_axis_label
x_var_src
x_var
x_scale
y_axis_label_list
y_var_src_list
y_var_list
y_var_label_list
y_var_colour_list
y_var_symbol_list
y_scale_list
options_list
dot_size
WRES_VS_X_GRPH
output_subdir
graph_title
x_axis_label
x_var_src
x_var
x_scale
y_axis_label_list
y_var_src_list
y_var_list
y_var_label_list
y_var_colour_list
y_var_symbol_list
y_scale_list
options_list
dot_size
CWRES_VS_X_GRPH
output_subdir
graph_title
x_axis_label
x_var_src
x_var
x_scale
y_axis_label_list
y_var_src_list
y_var_list
y_var_label_list
y_var_colour_list
y_var_symbol_list
y_scale_list
options_list
dot_size
SPAG_GRPH
output_subdir
graph_title
x_axis_label
x_var
x_scale
y_axis_label_list
y_var_src_list
y_var_list
y_var_label_list
y_var_colour_list
y_var_symbol_list
y_scale_list
options_list