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Simple Fit Example

[Generated automatically as a Fitting summary]

Inputs

Description

Name:fit_example1
Title:Simple Fit Example
Author:J.R. Hartley
Abstract:
One compartment model with elimination rate constant KE.
Keywords:one compartment model; iv_one_cmp_k
Input Script:fit_example1.pyml
Input Data:fit_example1_data.csv
Diagram:

Initial fixed effect estimates

f[KE] = 0.05
f[PNOISE] = 0.1
f[KE_isv] = 0.1

Outputs

Final objective value

303.073646611

which required 9 iterations and took 8.41 seconds

Final fitted fixed effects

f[KE] = 0.096943
f[PNOISE] = 0.21712
f[KE_isv] = 0.01684

Fitted parameter .csv files

Fixed Effects:fx_params.csv (fit)
Random Effects:rx_params.csv (fit)
Model params:mx_params.csv (fit)
State values:sx_params.csv (fit)
Predictions:px_params.csv (fit)

Plots

Dense sim plots

Alternatively see All dense_sim graph plots

Comparison

Compare Main f[X]

Variable Name Fitted Value Starting Value Prop Change Abs Change
f[KE] 0.0969428 0.05 0.938855 0.0469428

Compare Noise f[X]

Variable Name Fitted Value Starting Value Prop Change Abs Change
f[PNOISE] 0.217116 0.1 1.17116 0.117116

Compare Variance f[X]

Variable Name Fitted Value Starting Value Prop Change Abs Change
f[KE_isv] 0.0168404 0.1 0.831596 0.0831596
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