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Simple Tut Example

[Generated automatically as a Fitting summary]

Inputs

Description

Name:tut_example1
Title:Simple Tut Example
Author:J.R. Hartley
Abstract:
One compartment model with elimination rate constant KE.
Keywords:one compartment model; iv_one_cmp_k
Input Script:tut_example1_fit.pyml
Input Data:synthetic_data.csv
Diagram:

Initial fixed effect estimates

f[KE] = 0.05
f[PNOISE] = 0.1
f[KE_isv] = 0.1

Outputs

Final objective value

-48.4359049133

which required 8 iterations and took 7.04 seconds

Final fitted fixed effects

f[KE] = 0.10617
f[PNOISE] = 0.044936
f[KE_isv] = 0.02739

Fitted parameter .csv files

Fixed Effects:fx_params.csv (fit)
Random Effects:rx_params.csv (fit)
Model params:mx_params.csv (fit)
State values:sx_params.csv (fit)
Predictions:px_params.csv (fit)

Plots

Dense sim plots

Alternatively see All dense_sim graph plots

Comparison

Compare Main f[X]

Variable Name Fitted Value Starting Value Prop Change Abs Change
f[KE] 0.106171 0.05 1.12343 0.0561713

Compare Noise f[X]

Variable Name Fitted Value Starting Value Prop Change Abs Change
f[PNOISE] 0.0449363 0.1 0.550637 0.0550637

Compare Variance f[X]

Variable Name Fitted Value Starting Value Prop Change Abs Change
f[KE_isv] 0.0273899 0.1 0.726101 0.0726101
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