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Depot One Comp PK ignoring BLQ observations.

[Generated automatically as a Fitting summary]

Model Description

Name:blq_pk_norm_fit_ignore
Title:Depot One Comp PK ignoring BLQ observations.
Author:PoPy for PK/PD
Abstract:
Depot One Comp PK model, with BLQ (below level of quantification)
observations removed from data set.
Keywords:tutorial; pk; advan4; dep_two_cmp; blq
Input Script:blq_pk_norm_fit_ignore.pyml
Diagram:

Comparison

Compare Main f[X]

Variable Name Starting Value Fitted Value Abs Change Prop Change
f[KA] 1.0000 0.2317 0.7683 0.7683
f[CL] 1.0000 1.8509 0.8509 0.8509
f[V1] 20.0000 52.4457 32.4457 1.6223

Compare Noise f[X]

Variable Name Starting Value Fitted Value Abs Change Prop Change
f[PNOISE] 0.1000 0.1498 0.0498 0.4981

Compare Variance f[X]

Variable Name Starting Value Fitted Value Abs Change Prop Change
f[KA_isv] 0.0500 0.0000 0.0500 0.9999
f[KA_isv;CL_isv] 0.0100 0.0002 0.0098 0.9824
f[KA_isv;V1_isv] 0.0100 0.0004 0.0096 0.9638
f[CL_isv;KA_isv] 0.0100 0.0002 0.0098 0.9824
f[CL_isv] 0.0500 0.0393 0.0107 0.2150
f[CL_isv;V1_isv] 0.0100 0.0064 0.0036 0.3620
f[V1_isv;KA_isv] 0.0100 0.0004 0.0096 0.9638
f[V1_isv;CL_isv] 0.0100 0.0064 0.0036 0.3620
f[V1_isv] 0.0500 0.0990 0.0490 0.9793

Individual simulated (sim) plots

Alternatively see All simulated_sim graph plots

Population simulated (sim) plots

(No population graphs were requested.)

Outputs

Final objective value

-829.1447

which required 1.30 iterations and took 453.22 seconds

Fitted f[X] values (after fitting)

f[KA] = 0.2317
f[CL] = 1.8509
f[V1] = 52.4457
f[KA_isv,CL_isv,V1_isv] = [
    [ 0.0000, 0.0002, 0.0004 ],
    [ 0.0002, 0.0393, 0.0064 ],
    [ 0.0004, 0.0064, 0.0990 ],
]
f[PNOISE] = 0.1498
f[ANOISE] = 0.0100

Fitted parameter .csv files

Fixed Effects:fx_params.csv (fit)
Random Effects:rx_params.csv (fit)
Model params:mx_params.csv (fit)
State values:sx_params.csv (fit)
Predictions:px_params.csv (fit)
Likelihoods:lx_params.csv (fit)

Inputs

Input Data:synthetic_data.csv

Starting f[X] values (before fitting)

f[KA] = 1.0000
f[CL] = 1.0000
f[V1] = 20.0000
f[KA_isv,CL_isv,V1_isv] = [
    [ 0.0500, 0.0100, 0.0100 ],
    [ 0.0100, 0.0500, 0.0100 ],
    [ 0.0100, 0.0100, 0.0500 ],
]
f[PNOISE] = 0.1000
f[ANOISE] = 0.0100
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