PoPy Quick Reference Guide

Table 74 *PoPy* Quick Reference
Commands	Scripts	Sections
popy run popy create popy check popy format popy view popy info popy doc popy validate popy activate popy deactivate	fit gen sim tut comp mfit mgen msim mtut mcomp grph vpc fitsum gensum tutsum	METHOD_OPTIONS DESCRIPTION FILE_PATHS DATA_FIELDS PREPROCESS EFFECTS MODEL_PARAMS STATES DERIVATIVES PREDICTIONS ODE_SOLVER FIT_METHODS COVARIANCE OUTPUT_SCRIPTS OUTPUT_OPTIONS
Probability Distributions	Dosing Functions	Analytic Solutions
~unif(min,max)init ~norm(m,v) ~mnorm(m_vec,v_mat) ~bernoulli(p) ~poisson(p) ~negbinomial(p,r)	@bolus @inf_rate @inf_dur @gamma @weibull	@iv_one_cmp_cl @dep_one_cmp_cl @iv_two_cmp_cl @dep_two_cmp_cl @iv_three_cmp_cl @dep_three_cmp_cl
Variables	`c[X]`, `f[X]`, `r[X]`, `m[X]`, `w[X]`, `x[NEWIND]` `d[X]`, `s[X]`, `x[TIME]`, `p[X]`
TYPE values	obs, dose, pred, reset, reset+dose

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